Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFWYHSSKKAARKEEKIDYLDNKLKMFRNIEFIVSAISLAPLIACVFCPVLSEFGLVTLGVNFLVCFVGSLAFHMKHEKKSDNIEKAKEAVNSYNTPPSYFQNPDVGNSFPSASPYGSQYFPFY
2LIF Chain:A ((175-190))
------------------------------------SIFLLALLSCITVPVSAAQVK--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4953 for 55 contacts (-90.1/contact) +
2D Compatibility (PS) -1597 + (NN) -140 + (LL) 5888
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -3502.0 ( -63.67 by residue)
QMean score : -0.406
(partial model without unconserved sides chains):
PDB file :
Tito_2LIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LIF-query.scw
PDB file :
Tito_Scwrl_2LIF.pdb
: