Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDAENALSQILNGTNRLEFYKLLSYISWLIYQVILSSIYVIKKVLQAKLKLEPIIILKKCKGHNDGSIALFANSVTITPGTLTIDVAKKRQIYLSIMCLIDESLESGVSEIENEVLKILCSIR
1EM6 Chain:A ((392-465))
---------------------------------------LVEKLLPRHLE----IIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKD
General information:
TITO was launched using:
RESULT:
Template:
1EM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24593 for 398 contacts (-61.8/contact) +
2D Compatibility (PS) -7107 + (NN) 3811 + (LL) 3976
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -31213.0 ( -78.42 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_1EM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EM6-query.scw
PDB file :
Tito_Scwrl_1EM6.pdb
: