Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYN-HPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGHHE-GNVIMGQ----KGMH-LNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMS-PAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDV------I-PDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMND--RKQSVDIMTHHFK-QSRDVLTQSAAWT--SYG-DLTIKPSGYQEITTLVKQH--HLF-NPPAYDDFVEPSLYKEASRS |
| 3QSL Chain:A ((33-341)) | --------------------------------AKVQIAVGGKPLIYYLPLTIAEV--KGFFKDEGLDVSIADFAGGSKALQAVVGGSADVVSGAFEHTLSLQAKGQFYRAFALQGRAPMIGVGVSKKNLPGYKGPADL---KGRKIGVTAPGSSTNMVVNFFLAKHGLKASDVSFIGVGAGAGAVTALRSGQIDAISNTDPVVSMLETSGDIQIIVDTRTLKDTKEIFGGNMPAGCLYAPQAFVDANPNTAQALTNAIVRADKWIQKAGADEIAKAVPEGYLLGDPAVYKAAIGKSMEGLSPDGVIPEDGAATALKALAAFVPDFDAAKVDPAKAWTNEYTRRANE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122075 for 2594 contacts (-47.1/contact) +
2D Compatibility (PS) -31137 + (NN) -14301 + (LL) 2600
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -174013.0 ( -67.08 by residue)
QMean score : 0.471
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