Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLD--IANEILQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK
2O89 Chain:A ((10-100))
--------DFDSKVESGVQLVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVL-
General information:
TITO was launched using:
RESULT:
Template:
2O89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59313 for 592 contacts (-100.2/contact) +
2D Compatibility (PS) -9008 + (NN) 513 + (LL) 452
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -73256.0 ( -123.74 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_2O89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O89-query.scw
PDB file :
Tito_Scwrl_2O89.pdb
: