Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTTIKQAKDHLNQDVTIGAWLTNKRSSGK-IAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEIAQESSLYVTGTITE-DNRSDLGYEMQVKSIEVISEAHDYPI---TPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAFLSQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDD-----IEWGEDFGAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSERVDDLELLEQRVKEHGLDEEAYSYYLDLRRYGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRLLNRLYP |
2XTI Chain:A ((5-437)) | ----IRDLVKHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQ-VLLMDKLCQTYDALT--VNTECTVEIYGAIKEV--EAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSFLTQSSQLYLETCIPTLGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLLADEEAK-KLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTFTYGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLLMP-GVGEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPRFVGRCVP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XTI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160466 for 3315 contacts (-48.4/contact) +
2D Compatibility (PS) -44852 + (NN) -18590 + (LL) 496
1D Compatibility (HY) -33200 + (ID) 7200
Total energy: -263812.0 ( -79.58 by residue)
QMean score : 0.488
|
|
|