Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEHQNVKLNRTVKAAVLTVSDT--RDFVTDKGGQCVRQLLQADDVEVSDAHY---TIVKDEKVAITTQVKKWLEED-IDVIITTGGTGIAQRDVTIEAVKPLLTKEIEGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELNHLIHELTK
1UUX Chain:A ((7-162))
-------------KVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGL--LFVMMQESLKITPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALL-PALKHALKQI--
General information:
TITO was launched using:
RESULT:
Template:
1UUX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107846 for 1250 contacts (-86.3/contact) +
2D Compatibility (PS) -16016 + (NN) -4944 + (LL) 1032
1D Compatibility (HY) -9200 + (ID) 2650
Total energy: -139624.0 ( -111.70 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_1UUX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UUX-query.scw
PDB file :
Tito_Scwrl_1UUX.pdb
: