Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRMKPIFLLIFLLLASLIAREKDASSNLFDLIDKGINREQELKEQEQKTRLKLAQ--------SPLVALEIVPQETP-----YLEWQGARESYYLKVSAVVESVVILKIDINQGRSCSLYPTPKSVSLVRNQSVAYEILCENQPLWIEVSTNLGKRTFQF
2WK7 Chain:A ((251-362))
VNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGLTIRSESQIIGLETGDERNTEKVRDYLESNGVFGSVFCR-PATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYGDFYFR---------------------
General information:
TITO was launched using:
RESULT:
Template:
2WK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20470 for 479 contacts (-42.7/contact) +
2D Compatibility (PS) -10106 + (NN) 2801 + (LL) 960
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -33665.0 ( -70.28 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_2WK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WK7-query.scw
PDB file :
Tito_Scwrl_2WK7.pdb
: