Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRHVIAFGLKIEILKKYK-R---TLQAHDDLRQ-LEPLGFENTQGSVYLKDQ
2VO9 Chain:A ((94-133))
---YGVAVDLCLYTNDGKDVIWESTTSRWKKVVAAMKAEGFKWGGDWKSFKDY
General information:
TITO was launched using:
RESULT:
Template:
2VO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3702 for 133 contacts (-27.8/contact) +
2D Compatibility (PS) -3497 + (NN) 2313 + (LL) 372
1D Compatibility (HY) -400 + (ID) 250
Total energy: -5164.0 ( -38.83 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_2VO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VO9-query.scw
PDB file :
Tito_Scwrl_2VO9.pdb
: