Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMGLMNEEPKTPLLFISPGPGNPNSSGNLLKIIA-MAKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIA-LKKHAVFKGLGESMVVGRYHSLMA--SGLPKNLEVIAEH--DNIPMAIVNEEDKILAYQFHPESIMTLQGRALLEQSVGFLRELS
1T36 Chain:B ((236-356))
---------------------------------------------------IFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVV-------MITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQY
General information:
TITO was launched using:
RESULT:
Template:
1T36.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73909 for 852 contacts (-86.7/contact) +
2D Compatibility (PS) -12678 + (NN) -5612 + (LL) 3508
1D Compatibility (HY) -4000 + (ID) 1800
Total energy: -94491.0 ( -110.90 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1T36.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T36-query.scw
PDB file :
Tito_Scwrl_1T36.pdb
: