Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTNRARIDKSIENILKGKNIEEAKLHLPEITSTIKTGFIEKEISEQVYQSIIGVVSGKLSKIYDLDEDKC---KEITSDFIKREQWINEIMELVEQDNVTGISDVLLKALKIALGETVKAEQNETYFVEKLLYEIIFLSLENTMQGALETLEEGITIPQIRKEFIKPLADKLFEEDIKTEIPALVLGKTTLAVINNKIADKLKNFGGF |
| 1UDO Chain:A ((178-231)) | ----------------------------------------EEDSAAQVDMNVVGTGSGRLSEVHTMGEEYSFTKDELIKMLDLAQKGINELIEL------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1847 for 251 contacts (7.4/contact) +
2D Compatibility (PS) -5493 + (NN) -728 + (LL) 12420
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 5696.0 ( 22.69 by residue)
QMean score : 0.265
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