Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLLAILSMVLLLSLAACGGSSDSSKDKNGKEEIVMWGSWSGDQIKQLEKQIDSYNKSQDKYKVKYVM----QENVEEKLLTGIAGGELPDIIMWDRYQTALYAPKGVLEPLDKLVKEDNLKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEAGVKPPTTWDELATAAQKTTKWDGNKMTQAGMSLQ--DVGLFNLYLMQAGGELVTSDNKETAFNSEQGLEVLNYWDKMQNDLKVYQRGFDDGSD-------AFAAGKEAMTYNGPWALADYN---KVEDL-DYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKISGWLPANKIAAEDEYFTKDPNYSVFVNTMKYAKIRPTVA-GYADVEGLAMKPQFEKFMNGNISAEKALSQAEKEGNQILKEERDK |
| 3K02 Chain:A ((27-407)) | -----------------------------------VTFWDTSNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSGA-PDVMRTEVAWVADFASIGYLAPLDGTPALDD--GSDHLPQAAASTRYEGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITE----KTGATGLYLRGDDPYWFLPYLYGEGGDLVDEKNKTVTVDDEAGVRAY----RVIKDLVDSKAAITDASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDAGNLGVAPVPAGSAG-QGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEKLS-LLPTRTSVYEVPSVADNEMVKFFKPAVDKAVERPWIAEGNALFEPIRL--QMANVLSGETSPDEAAANTGDAYRKLLKD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39794 for 3193 contacts (-12.5/contact) +
2D Compatibility (PS) -38969 + (NN) -19945 + (LL) 2540
1D Compatibility (HY) -13600 + (ID) 5400
Total energy: -115168.0 ( -36.07 by residue)
QMean score : 0.461
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