Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVVIIGGGIVGASAAYLLSKENVQVTLIDSDEAGQ--ATRAAAGIICPWLSKRR---NKYWYELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLAELFNLARERRLDAEVMGEVAKLSEAETKQRFPLVKSGFGSVYVSGAARVNGGLFC-----ETLLYAAKENGVKI--KAGRAHFSSDGEVVI-----DGEKEHYDKLILATGAWLKDLLQDAGF-------QTDVLAQKGQLLELNFSEFQTDDWPVILPPSAKSIVPFDNGKIIVGATHEKAA---GFNTEPTAEGKAEILTEVSQFM---EGDLASKVAHVSVGTRPYTPDFTPIIGQLPGFES-----------------------VFLANGLGASGLTTGPYVGRILADLALGNASDFVLENYEPSKYISR |
| 3PS9 Chain:A ((273-639)) | -REAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDW---CGVTQLGW--DEKSQHKIAQMLSM--------DLPAELAVAVEANAVEQITGVATN-----CSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATH-SVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELK----QVLCYDGYLTPQNPA-----NQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEAR--CGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILA----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101180 for 2565 contacts (-39.4/contact) +
2D Compatibility (PS) -33085 + (NN) -118 + (LL) 3488
1D Compatibility (HY) -20400 + (ID) 4250
Total energy: -155545.0 ( -60.64 by residue)
QMean score : 0.440
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