Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEIKFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGDIYDSEDQ-SVRAQARFAKEMKRLEVANIPVFMIHGNHDFIEKHKEKLALPSN-VHVFSEQVEVMLH------KTATGVSVNIYGFSYNE------------RHIRSSRIDEY--KVQGDADFHIALLHGSEVSSSEEHDVYAPFRV---QEISKKGFDYWALGHIHKRQLLAESPSIYYPGN-IQGRNRKESGEKGASIINLSEASTTIDFIGTSPIIWEEIIIPLPKNSEINAFYREITNVLESYQGRSHSYFLHIIIQMASSQKINTNDWLQMLQEEVELSNTTFVWVHKLTTEITNRSNLQTWYESHLAGEEIRRSFEQLQDESAFYQSVEALYLESGANRYLDDLSEQERERLLENALMELGMTLAEVEGDEK |
| 4O4K Chain:A ((16-269)) | LKELKILHTSDWHL-----GVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRM-MRTAPVVVLPGNHDW-----KGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101472 for 1752 contacts (-57.9/contact) +
2D Compatibility (PS) -24492 + (NN) -9821 + (LL) 14672
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -141213.0 ( -80.60 by residue)
QMean score : 0.467
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