Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------MSFIIRKGKILALLIAFLVINQLVPILAVWLLKNHYQTPFTSILLIGLELLIIALFLYYAKVKQ----IIRWKALLTRKALVTIFLGWLS---------------LRVPQIIGYLIMTMQGVKDTANQTVIMELTKQLPLALMLIFTIIGAPIMEEIIFRYIIPKELFAKHQK--------WGFVIGTLAFALIHSPS------DIGSFIIYAGMGAILSFVYYKTEHLEYSIMVHFINNALAYSVLISTMMNN---------------------------------------------
4J72 Chain:A ((20-363))FAFNVLKYITFRSFTAVLIAFFLTLVLSPSFINRLKKYTPTMGGIVILIVVT--LSTLLLMRWDIKYTWVVLLSFLSFGTIGFWDDYVKLKNKKGISIKTKFLLQVLSASLISVLIYYWADIDTILYFPFFKELYVDLGVLYLPFAVFVIVGSANAVNLTDGLDGLAIGPAMTTATALGVVAYAVGHSKIAQYLNIPYVPYAGELTVFCFALVGAGLGFLWFNSFPAQMFMGDVGSLSIGASLATVALLT--KSEFIFAVAAGVFVFETISVILQIIYFRWTGGKRLFKRAPFHHHLELNGLPEPKIVVRMWIISILLAIIAISMLK


General information:
TITO was launched using:
RESULT:

Template: 4J72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -213531 for 1690 contacts (-126.3/contact) +
2D Compatibility (PS) -22678 + (NN) -10710 + (LL) 248
1D Compatibility (HY) -8000 + (ID) 2050
Total energy: -256721.0 ( -151.91 by residue)
QMean score : 0.251

(partial model without unconserved sides chains):
PDB file : Tito_4J72.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J72-query.scw
PDB file : Tito_Scwrl_4J72.pdb: