Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------MSFIIRKGKILALLIAFLVINQLVPILAVWLLKNHYQTPFTSILLIGLELLIIALFLYYAKVKQ----IIRWKALLTRKALVTIFLGWLS---------------LRVPQIIGYLIMTMQGVKDTANQTVIMELTKQLPLALMLIFTIIGAPIMEEIIFRYIIPKELFAKHQK--------WGFVIGTLAFALIHSPS------DIGSFIIYAGMGAILSFVYYKTEHLEYSIMVHFINNALAYSVLISTMMNN--------------------------------------------- |
4J72 Chain:A ((20-363)) | FAFNVLKYITFRSFTAVLIAFFLTLVLSPSFINRLKKYTPTMGGIVILIVVT--LSTLLLMRWDIKYTWVVLLSFLSFGTIGFWDDYVKLKNKKGISIKTKFLLQVLSASLISVLIYYWADIDTILYFPFFKELYVDLGVLYLPFAVFVIVGSANAVNLTDGLDGLAIGPAMTTATALGVVAYAVGHSKIAQYLNIPYVPYAGELTVFCFALVGAGLGFLWFNSFPAQMFMGDVGSLSIGASLATVALLT--KSEFIFAVAAGVFVFETISVILQIIYFRWTGGKRLFKRAPFHHHLELNGLPEPKIVVRMWIISILLAIIAISMLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213531 for 1690 contacts (-126.3/contact) +
2D Compatibility (PS) -22678 + (NN) -10710 + (LL) 248
1D Compatibility (HY) -8000 + (ID) 2050
Total energy: -256721.0 ( -151.91 by residue)
QMean score : 0.251
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