Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLEAKKLGFYHKKDQ-WLFKEINLEVAPGQVLGIFGQSGCGKTSLSKVLAGFLHPRSGEVLVDGSNL----PNKAFRPVQLIQQHPE----------KTMNPLWPMKKSLEEAYYP-SRDLLDAFGIQEKW---LNRRPSELSGGELQRFSIVRSLHPETKYLIADEMTTMLDSITQASVWKSLLEIVKDRNLGLIVISHDFAMLEKLCNQCYMIEENRIVSFNGD
2PMK Chain:A ((7-218))-----RNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISE--LREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRT--VIIIAHRLSTV-KNADRIIVMEKGKIVEQGKH


General information:
TITO was launched using:
RESULT:

Template: 2PMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102039 for 1389 contacts (-73.5/contact) +
2D Compatibility (PS) -20018 + (NN) -2533 + (LL) 752
1D Compatibility (HY) -17200 + (ID) 3150
Total energy: -144188.0 ( -103.81 by residue)
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_2PMK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PMK-query.scw
PDB file : Tito_Scwrl_2PMK.pdb: