Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKFFLESERLIIRPLEESDYDSWYTSFMNR-------GPSLTPFDDGILDMSMCDINWFKNLVNLQRKEWESDIVYIFGVFLKSGEHVGMLNIVTLARADMQWGELGYVFHNQFWSNGYAFESILALLNSTYEKLGFHHIEAQITPGNERSENLVRRLGLTYETTRKDFSFENGKWTDKLIYSINLHNNNLE
2FSR Chain:A ((30-170))
-----LRTERLTLRPLAMADFPA-YRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGH----------GALMIDLG---ETGECIGQIGINHGPLFPEK--ELGWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAPRSDPEDLVYRYHQ------------
General information:
TITO was launched using:
RESULT:
Template:
2FSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74079 for 953 contacts (-77.7/contact) +
2D Compatibility (PS) -14351 + (NN) -2127 + (LL) 2856
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -96801.0 ( -101.58 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_2FSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FSR-query.scw
PDB file :
Tito_Scwrl_2FSR.pdb
: