Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLDILYCKLAMCTTLLTERLRLQPVDLSNINDFLEFS-SDSETVFYMQRYKANTTEEAQMVLANVCMKSPLGIYAMIETESNKMIGIIELEIRDEFSAEFGYILNKNYSGKGYMTEACSKLMSVGFEYLDLERIYARFDINNKKSGNVMERLGMKKEGEL-RHLAKNPKGEWKTRAYYSILKEEYFNKVNTK
2ZW4 Chain:A ((8-163))
------------HTAHLRTARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTS-CAAAPGARLWTIRAPDGTVPGMAGLLGGTDVPG-LTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLTTLAVIT
General information:
TITO was launched using:
RESULT:
Template:
2ZW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88168 for 1137 contacts (-77.5/contact) +
2D Compatibility (PS) -16145 + (NN) -2322 + (LL) 1408
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -109877.0 ( -96.64 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_2ZW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZW4-query.scw
PDB file :
Tito_Scwrl_2ZW4.pdb
: