Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIIAITEKVIKELFRDKRTLAMMFLAPILIMFLMNVMFSANSNTKVKIGTINVNTKVVSNLDNIKHIKVRSFKFNSSAKKALKSNKIDALISEDNKSYTLFYANTDSSKTTLTRQAFKTAVNTMNSKELISQVKILANKNPKLAQSLQTRSKYIKEKYNYGNKNTGFFAKMIPILMG----FMVFFFVFLISGMALLKERTSGTLDRL-LATPVKRSDIVFGYML----------SYGILAIIQTIVIVLSTIWLLDIQVVGSIFSVIIVNFILALVALSLGILMSTLAKSEFQMMQFIPLIIMPQLFFSGIIPLENMANWAQTVGKILPLSYSGDALTKIIMYGQGLSNVSSNLLVLLLFLIILTIANIFGLKRYRKV |
4KHZ Chain:F ((414-497)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------FFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVN------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KHZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24748 for 355 contacts (-69.7/contact) +
2D Compatibility (PS) -7194 + (NN) -2779 + (LL) 24564
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -18457.0 ( -51.99 by residue)
QMean score : 0.062
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