Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVAEDQSMLRDAMCQLLLMEESVSTIDQAGNGGEAIAILSNKAIDVAILDVEMPILSGLDVL-EWVRKYQNVKVIIVTTFKRSGYFQRAIRSNVDAYVLKDRSVADLMKTIQKVLSG----GKEYSPELMENVIS-----NPLS---EQEIKILSLIAQGKTSKEIACTLFLSNGTVRNYTSNIFDKLGVNNRLEALKIAREKDWL
3C3W Chain:A ((2-206))
VKVFLVDDHEVVRRGLVDLLGADPELDVVGEAGSVAEAMARVPAARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALMAKLRGAAEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRS
General information:
TITO was launched using:
RESULT:
Template:
3C3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119908 for 1471 contacts (-81.5/contact) +
2D Compatibility (PS) -20384 + (NN) -3939 + (LL) 0
1D Compatibility (HY) -16400 + (ID) 2850
Total energy: -163481.0 ( -111.14 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_3C3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3W-query.scw
PDB file :
Tito_Scwrl_3C3W.pdb
: