Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLERQKLLAKVAYLYYMEGKSQSEIANELGIYRTTISRMLAKAREEGLVRIEISDFNPEIFQLESYFKSKYHLKDIEIVSSRKDSDTSEIEKDLAHVAAAMIRKKIKENDKVGIAWGRTLSKVVEAMRPHPVSQ-VSFVPLAGG-PSHINARYHVNTLVYEMSRRFQGSCTFINATLVQENANLAKGILTSKYFEGLMDNWEKLDVAIVGVGGKPKSNEQQWL--DLLNQDDFQCLDEEAAVGEITCRFFNHSGDPV-NQHLAKRTIGITLEQLQKVPNRIAVAHGNYKAAALLAVLKKGYINHLVTDFSTALNILRLDKDTFVDTIYQKS |
| 4L50 Chain:A ((17-265)) | ---------------------------------------------------------FEGCLEYETQLRRQFSLQHVRVIPGLA--D---VGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAAC---------SVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174040 for 2115 contacts (-82.3/contact) +
2D Compatibility (PS) -26046 + (NN) -13583 + (LL) 7188
1D Compatibility (HY) -19600 + (ID) 3400
Total energy: -229481.0 ( -108.50 by residue)
QMean score : 0.442
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