Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMEKYTSIKQSGRHYGLDLLRIISMFMIVITHVLGKGGLRSSVEGHADSYFIVTWIIQVLVYGAVNCYALISGYVGINSRYRYSKLLSIWAQVFFYTFTITALFAITGHEVTLLNWRDAFFPIVSGQYWYITAYFGLLVFMPVINNGLNALTDKQLKQLVLLMFII-------FSILPAVLNNRVPEFSLSKGFEMTWLLILYIIGAYLKRIDLNIFKTSYLLI--IYLLSLVATYAMKFSVGDIWYWYVSPTLTLGAVSLFILFA---RASIKPSGFLKKIIVVLAPSTLGVYLCHLHPLIVKYFVRD--FAETFVYESI-YLYPFLILGAGILIYLLAFIVERIRLRIFKAIHFSNFLRWFDDKFPY |
| 4X2Z Chain:A ((9-309)) | ---QKTIYLTEDGVKYRSIVLKPGDS-LGQFGQVYAKNKIVFTADDVEDKEILYVP----------TTDKSILEYYGLD-AQKYVIYLQTLAQKWNVQYR---------DNFLILEWRDGNCWISSAIVLLQAA---KIRFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDANWLLANLAEHFD--ADYTNAFLKKRVSCNCGIKSYELRGLEACIQPVRATNLLHFKTQYSNCPTCGA----NNTDEVIEASLPYLLLFATDGPATVDCDEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYTR----------------------------FAFKNETS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -302385 for 2169 contacts (-139.4/contact) +
2D Compatibility (PS) -30113 + (NN) 2554 + (LL) 7480
1D Compatibility (HY) -6000 + (ID) 2250
Total energy: -330714.0 ( -152.47 by residue)
QMean score : 0.175
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