Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQSLNKTVEFQTTGVSYLGMGNKVGKFLVGDQALEFYNDKNV------NDYIQIPWTSINQIGANVSRKKISRHFEVFTDQGKFLFASKDSGTILKHARRHIGDDKVVKLPTLIQTILKIFKFKK |
1K28 Chain:D ((22-112)) | -AWSNNRFVELAATITTLTMRDSLYGR---NEGMLQFYDSKNIHTKMDGNEIIQISVANANDINNVKTRIYGCKHFSVSVDSKGDNIIAIELGTIHSIENLKFGRPFFPDAGESIKEMLGVIYQDR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1140 for 463 contacts (2.5/contact) +
2D Compatibility (PS) -8546 + (NN) 1568 + (LL) 708
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -9230.0 ( -19.94 by residue)
QMean score : 0.148
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