Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MQGLEIVMDIDTLEIYEVID-------HDQEMSSDVTEETADHISIQQVSQVTFYQMNLFDEMNLANTS-------------------
1XEQ Chain:A ((15-103))
GATNATINFEAGILECYERFSWQRALDYPGQDRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLFMDPSAGIEGFEPY
General information:
TITO was launched using:
RESULT:
Template:
1XEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2489 for 367 contacts (-6.8/contact) +
2D Compatibility (PS) -6401 + (NN) 784 + (LL) 0
1D Compatibility (HY) 800 + (ID) 500
Total energy: -7806.0 ( -21.27 by residue)
QMean score : -0.052
(partial model without unconserved sides chains):
PDB file :
Tito_1XEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XEQ-query.scw
PDB file :
Tito_Scwrl_1XEQ.pdb
: