Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MGTVNIQVEIDPEAYVTGL--EHAKETKLMPEELLEGENNG
4E1P Chain:A ((4-58))
KVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRV
General information:
TITO was launched using:
RESULT:
Template:
4E1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2325 for 174 contacts (-13.4/contact) +
2D Compatibility (PS) -4745 + (NN) -4022 + (LL) 0
1D Compatibility (HY) -800 + (ID) 200
Total energy: -12092.0 ( -69.49 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_4E1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E1P-query.scw
PDB file :
Tito_Scwrl_4E1P.pdb
: