Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYVIFSFEEGDY---LCDNKDKLLIFESRGLAYQYMQKHYLKPIPLQKTKRIMYPMSYYQAPFKVQQVC
2K49 Chain:A ((3-32))
GWYELSKSSNDQFKFVLKAGNGEVI-LTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLK
General information:
TITO was launched using:
RESULT:
Template:
2K49.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6683 for 104 contacts (-64.3/contact) +
2D Compatibility (PS) -3009 + (NN) -1167 + (LL) 204
1D Compatibility (HY) -800 + (ID) 150
Total energy: -11605.0 ( -111.59 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_2K49.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K49-query.scw
PDB file :
Tito_Scwrl_2K49.pdb
: