Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRNGSWEKYDNLDFLNRVGVAEAMLGKELMPKEARQDIS----SVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSG-------ENANVKNLFTGTRALNANFNDDKSSMVYYENEVANYIKKTNHHVRYRVTPLFKN-VELVARGVRIEAQSIEDETISFDVYIFNGQPGYDIDYLTGSSEKIMITK |
| 4QH0 Chain:B ((57-220)) | -----------------------------------------------------------------------------------------------------IDNQQRPSTANAMLDRTIRQYQNRRDTTLPDANWKPLGWH--QVATNDHYGHAVDKGALIAYALAGNFKGWDASVSNPQNVVTQTAHSNQSNQKINRGQNYYESLVRKAVDQ-NKRVRYRVTPLYRNDTDLVPFAMHLEAKS-QDGTLEFNVAIPNTQASYTMDYATGEITLN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QH0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39831 for 1164 contacts (-34.2/contact) +
2D Compatibility (PS) -16189 + (NN) -2395 + (LL) 7244
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -59821.0 ( -51.39 by residue)
QMean score : 0.320
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