Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLYFPSISEETFDFEADWLVKAMDDNQKRILFVGQGKNGDLE----LELNYQDNPEPFDNLSVGELVQLPKELFVVPETISYQPQYECF
2F9H Chain:A ((59-93))
---------------------KIGDTNYTITKVGSFANSNLQSIAHSTLIFADAPTDEDDVIRNGVYLTPHQLPKITIGTTIDYLV---
General information:
TITO was launched using:
RESULT:
Template:
2F9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6783 for 115 contacts (59.0/contact) +
2D Compatibility (PS) -3165 + (NN) 911 + (LL) 1740
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 4619.0 ( 40.17 by residue)
QMean score : 0.092
(partial model without unconserved sides chains):
PDB file :
Tito_2F9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F9H-query.scw
PDB file :
Tito_Scwrl_2F9H.pdb
: