Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAFIPFKKSNKCVVTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLDSFQHSIEESLPYMTFQQAELLFQSLKDAYGHFQLKKVAICHLEGKQAVSEGEVFASPFIIDSRYQNLLLPLIQSIMIGPDFQSYTYQEKREYFVNQIYPAYKVSLGIQESALPLFPEEGEQIPLDNTFVANRRVASIPTTSSEPRKPNSSFSLKKVYLLMGFLATLAAGAMVSSVSLHAELSKQQEQVNYLYQEWKDIQNLSDKEHQIDVFSRYFLPNYYSGKK-------ENLSDFLSDGDAKYT-VPKEGSLQSVILEKVTYDAKTKHYQLTYVLTIK-----AK-------EQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN
3UB1 Chain:A ((6-135))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLETQAFSFAEEFAWDYFSRYPSDTQDFVRRITKYTTEQLANEMNNGTYSDVIYTSAFYFEKYS-ENQVNVSVKARVRVYTPKAGQEQDQLQYDTNLVDYYLEVPIVFDKDMNMAVDALPVMTAPPEKA


General information:
TITO was launched using:
RESULT:

Template: 3UB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -27254 for 721 contacts (-37.8/contact) +
2D Compatibility (PS) -11007 + (NN) 4680 + (LL) 18544
1D Compatibility (HY) -400 + (ID) 750
Total energy: -16187.0 ( -22.45 by residue)
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_3UB1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UB1-query.scw
PDB file : Tito_Scwrl_3UB1.pdb: