Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVFLKILVPLVSLVFLISLGITILAGVLGAVGGSQSNCTIEVVTSTSTDSSISSGDGSIDSFVKEHKEAYILSWKAGGFLPSASITQTMIENGFNFTNPNGTSLWQAH-NMGGVKTSSKSNFPVTLATYGQDSVDLSGTKPGAR-VGDGTGGAYTWFSSYDAGIVGKAEFMAHQTL-----YTKAIN-NIDGIATLSAIADGGWATDGTYKTKLIDMYHKLGKTYEWLDKEAISAHGDKPYKATTASAGDAGLSDIFTSNSKDCSDSSSGGATDGTGTVPADAIAWGYRPDNLPESLKQYIIDPKSLGMAYANSSGWFNPGSDYLAGQCVNLTISLGNHLWGHSGSVSGNGKDQAGAWANIFGNSVKTTPKRGAIFSTQNGGGGYGHTGIVCHVFENGSILIVEQNTPLSGADYFKKSYTWNYRIWTPAQQKAEVISFAYPYGKEPKLGN |
| 3FI7 Chain:A ((23-179)) | ------------------------------------------------------LASTPTFQQTFINSISTQAMDLCKKYNLYPSVMIAQAALESNWGRSEL----GKAPNYNLFGIKGS-----------YNGKSVTMKTWEYSDSKGWYQINANFAKYPSHKESLEDNAKKLRNGPSWDSSYYKGAWRENAKTYKDATAWLQGRYATDNTYASKLNTLISSYNLTQYD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43103 for 1090 contacts (-39.5/contact) +
2D Compatibility (PS) -15859 + (NN) -3055 + (LL) 11692
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -56975.0 ( -52.27 by residue)
QMean score : 0.304
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