Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFAKEYPTTVLLVSLTTLVFLLMQLTYGSQAESSQVIFQFGGIQGDYLKAYPT---NLWRLISPIFVHIGWEHFLLNGLALYFVGQMGESIWGSLRFLILYILSGLM-GNIFTLFFTPHVVAAGASTSLFGVFSAIAIAGYFGKNP----YLKQVGKSYQVMILLNLFFNIFTPGVSLAGHVGGLVGGVLVAIFLTKQNGSLLFKTWQSILALMIFIIVSISLIGLSLV
4QO0 Chain:A ((9-179))
--------PVTWVMMIACVVVFIAMQIL-GDQEVMLWLAWPFD----------PTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWF--GGLSGVVYALMGYVWLRGE--RDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLN-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137191 for 1283 contacts (-106.9/contact) +
2D Compatibility (PS) -16300 + (NN) -2141 + (LL) 5216
1D Compatibility (HY) -18800 + (ID) 2000
Total energy: -171216.0 ( -133.45 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_4QO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QO0-query.scw
PDB file :
Tito_Scwrl_4QO0.pdb
: