Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKSNYFKGQIDYAVVIPVFFLLMIGLASIYVATMN-DYPSNIYIAMFQQVSWIIMGCIIAFVVMLFSTEFLWKATPYLYALGL-TLMVLPLIFYSPQLFAATGAKNWVTIGSVTLFQPSEFMKISYILMLSRITVSFHQKNRKTFQDDWKLLGLFGLVTLPVMILLMLQKDLGTALVFLAILSGLIL--LSGISWWIILPILSTIVLFIASFLMIFISPNGKEWFYNLGMDTYQINRLSAWIDPFSFADSIAYQQTQGMVSIGSGGVTGKGFNILELSVPVRESDMIFTVIAENFGFIGSAIVLGLYLIIIYRMLRITIESNNQFYTFISTG--FIMMIVFHVFENIGAAVGILPLTGIPLPFISQGGSSLLSNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI-- |
| 3J6V Chain:I ((68-396)) | -SYTVDFIKKQIEE-----------FNIGKRHLANMMGEDPET------------------------FTQEDVDRAITYLFPSGLFEKRARPIMKHPEEIFPKQRAVQWGEDGRPFHFLFYTGKQSYYSLMHEAYGKVLHAEER---QDQLRAKGLFSEKSKS-------KDLIGSRWLIKEELEEMLVEKLSDQDYAQFIRLLERLSALPCD--------AAEEEFVGRFRRTVTVQSKKHLIEPLQYDE-------QGMA-----FSTGQG--------KRKTANAEAVVYGHGSGKI---EINGVDYLLYFPVTQDREQLMFPFHFLDRLGKHDVTCTVSGGGRSSQAGAIRLAMSRALCSFITE---DEVEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187105 for 2562 contacts (-73.0/contact) +
2D Compatibility (PS) -31978 + (NN) 13656 + (LL) 8744
1D Compatibility (HY) -1200 + (ID) 3050
Total energy: -200933.0 ( -78.43 by residue)
QMean score : 0.109
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