Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIISLGEVLLRLSPPQYHTLMQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAII-KKEGRLGIYYYEQGFSVRTNKVIYDRNYSSFWESTLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSFQEAREQLSPLLGLLD-VCFGL-EPIYLAGESEDLKDELGLSRPYLDIELLEKITQKIVQEYGLDYIAFTQREMEYTNQYMLKSYLYHNNMLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKETPQRALEIAMATFKYKHTIQGDINIMTRDDIAYLIEKETNDIKR |
| 4DU5 Chain:A ((29-297)) | ---VITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDG--PPVEYHRKGSAASHMGVADIDEAWLLS-ARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT----PEGVARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFP----------------------------VGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQGLPTRAELNAA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144201 for 2141 contacts (-67.4/contact) +
2D Compatibility (PS) -27017 + (NN) -3361 + (LL) 4092
1D Compatibility (HY) -4400 + (ID) 3350
Total energy: -178237.0 ( -83.25 by residue)
QMean score : 0.317
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