Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKLVATDMDGTFLDENGTYDKKRLAN----VLKKFKEQGIVFTAASGRSLLSLEQLFADFR--DQMAFIAE-NGSAAVLF--NRLAYEQHLSREQYLDIIDHLSKSPYMENNEYVLSGKDGAYILSDANPD-YIEFITHYYDNLQKVSHFED-VDDIIFKVTANF------------TEETVR-QAEEWVNQAIPYTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIGHHNNQAVMAYLESMVD |
4DW8 Chain:A ((6-268)) | --KLIVLDLDGTL-----TNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNE-VVPVLYECARTNHLSILTY-----DGAEIVTENSLDPYVQ--KEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYF---------LELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIF- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83877 for 1987 contacts (-42.2/contact) +
2D Compatibility (PS) -25303 + (NN) -8841 + (LL) 1732
1D Compatibility (HY) -18000 + (ID) 3550
Total energy: -137839.0 ( -69.37 by residue)
QMean score : 0.397
|
|
|