Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEI-GEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQAAKA
3TJT Chain:A ((11-204))
-------LPYAYDALEPYIDKETMKLHHDKHYQAYVDKLNAALEKYPELYNYSLCELLQNLDSLPKDIATTVRNNAGGAYNHKFFFDIMTPEKTIPSESLKEAIDRDFGSFEKFKQEFQKSALDVFGSGWAWLVATKDGKLSIMTTPNQDSPVSKNLTPIIGLDVWEHAYYLKYQNRRNEYIDNWFNVVNWNGALENYKNL--
General information:
TITO was launched using:
RESULT:
Template:
3TJT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100973 for 1507 contacts (-67.0/contact) +
2D Compatibility (PS) -20214 + (NN) -6094 + (LL) 928
1D Compatibility (HY) -19600 + (ID) 5150
Total energy: -151103.0 ( -100.27 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_3TJT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJT-query.scw
PDB file :
Tito_Scwrl_3TJT.pdb
: