Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKNIGDVSYFRLNNEINRPVNGQIPLHKDKEALTAFFKENVQPNSKAFDSITDKIAYLLKYDYLEEAFLNKYRPEFIEELSTKLFDKKFRFKSFMAAYKFYQQYALKTNDGEYYLESIEDRVLFNALYFADGDEKLATDLALEMISQRYQPATPSFLNAGRSRRGELVSCFLIQVTDD-MNAIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGFAGAASGVVPVMKLFEDSFSYSNQLG-QRQGAGVVYLDVFHPDIISFLSTKKENADEKVRVKTLSLGITVPDKFYELARNNQEMYLFSPYSIEREYGVPFSYIDITEKYDELVANPNITKTKINARDLETEISKLQQESGYPYIINIDTANRTNPID--GKIIMSNLCSEILQVQKPSLINDAQEYLEMGTDISCNLGSTNVLNMMTSPDFGKS-----------IKTMTRALTFVTDSSNIEAVPTIKNGNAQAHTFGLGAMGLHSYLAKNHIEYGSPESIEFTDIYFMLMNYWTLVESNNIARERQTTFVGFEKSKYADGTY-FDKYVSGKFVPQSDKVKSLFANHFIPEAKDWENLRYAVMKDGLYHQNRLAVAPNGSISYINDCSASIHPITQRIEERQ------------------EKKIGKIYYPANG--LATDTIP-----YYTSAYDMDMRKVIDVYAAATEHVDQGLSMTLFLRSELPKELYEWKTESKQTTRDLSILRNYAFNKGVKS-IYYIRTFTDDGSEVGANQCESCVI |
| 2CVW Chain:A ((133-745)) | ----------------------------------------------------------------------------------SAIVYDRDFQY-SYFGFKTLERSYLLRIN-GQV-AERPQHLIMRVALGIHGRDIEAALETYNLMSLKYFTHASPTLFNAG-TPKPQMSSCFLVAMKEDSIEGIYDTLKECALISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAP---GLSDCYGDEFEALYTRYEKEGRGKT-IKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNLGVIKSSNLCCEIVEYSAPD------------ETAVCNLASVALPAFIETSEDGKTSTYNFKKLHEIAKVVTRNLNRVID-RNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEA-RLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMW--------DQKPYGMW---------DWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYS--FQVVNPYLLRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVYIDQSHSLNLFLRAP--------------TMGKLTSMHFYGWKKGLKTGMYYLRTQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214924 for 4964 contacts (-43.3/contact) +
2D Compatibility (PS) -59740 + (NN) -18651 + (LL) 10100
1D Compatibility (HY) -30800 + (ID) 7800
Total energy: -321815.0 ( -64.83 by residue)
QMean score : 0.384
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