Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAE-YRGMKCPRYDTLNPVDLET-PIYPEHNQDYLQECLWNLKAKGIDLPINKIK
3QYW Chain:A ((16-77))
------------------------------------------------------EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG
General information:
TITO was launched using:
RESULT:
Template:
3QYW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2863 for 322 contacts (-8.9/contact) +
2D Compatibility (PS) -6047 + (NN) 2356 + (LL) 4132
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -7822.0 ( -24.29 by residue)
QMean score : 0.018
(partial model without unconserved sides chains):
PDB file :
Tito_3QYW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QYW-query.scw
PDB file :
Tito_Scwrl_3QYW.pdb
: