Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTVEHFVTKFVPENYNLFLDINRQTKTFSGNVAVSGEALDNNISFHQKGLTIKSVLLDNQPLDFQLDEDNEAMHIQLHETGSMVLVFEFSGHITDNMTGMYPSYYTVNGIKKEVISTQFESHFAREVFPSIDEPEAKATFDLSLKFDQKEGEIALSNMPEINAEQR-QETGLWT---FDTTPKMSSYLLAFALGELHGKTTHTKNGTLVGSYA-----TKAHQLNELDFSLDIVVRVIEFYEDYFGVRYPIPQSLHVALPDFSAGAMENWGLVTYREVYLLVD-ENSSVSSRQQVALVVAHEIAHQWFGNLVTMKWWDDLWLNESFANMMEYVSIDYIEPKLNIFEDFQTGGLPLALKRDATDGVQSVHV------EVNHPDEINTLFDPAIVYAKGSRLMHMLRRWLGDTDFAAGLKIYFEKHQYQNTIGRDLWNAL-----SQTSGK---DVAAFMDSWLEQPGYPVMAAKIEEDELILTQKQFFIGEHEDKSR------LWQIPLNSNWEGIPEILTEETVVIPNFSQLAE---KNKENGALRFNTENTAHYITNY---QGQLLEH-IISDLPLMDNISKLQIVQERHLLAESGMISYSSLIPLVSLLSQETSYLVNSAIKSVIDGLSLFVQEDSQDEFDFKEFVNKLSAFNFNRLGFEKREGEGDDSEMVRHLSLSLALYSDNEHAIEEAHHIFKA--------HENNIAAIPAAIRLLVLTNEMKH-------FESKELSHLLLETYSTTTDGNFKRQLASALSHTTDSKTLKKLLSDWKNKDIVKPQDLAMSWYATFLKNSFTQQSVWEWAQENWEWI-KATLGGDMSFDKFVIYPSSSFKTEERLEQYKNFFEPQLSDMAI---SRNISMGIKEISARVLLITKQKEEVINTIKKYI |
4HOM Chain:A ((114-895)) | ----------------------------------------------------------------------------------------EFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLI--HPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGM----YALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVM---AVDALASSHPLTTPAEEVNTPAQISEMFD-SISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGV----MQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMF-DRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENLAKTLFDQWMSDPENN--PIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLV--------NEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQD-ATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNM-DVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIEHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214560 for 6015 contacts (-35.7/contact) +
2D Compatibility (PS) -76687 + (NN) -24489 + (LL) 7604
1D Compatibility (HY) -51200 + (ID) 11750
Total energy: -371082.0 ( -61.69 by residue)
QMean score : 0.390
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