Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLIEPIRNGKRITDGAIALAMQVYILQNVFLD-DDILFPYYCDPKVEIGKFQNAVIETNQEYLKEHDIPVVRRDTGGGAVYVDSGAVNICYLM--KDHGQFGDFKRAYEPAIKALKTLGAS-SVEMRGRNDLIIDGK-KVSGAAMTIVNGRIYGGYSLLLDVDFDAMEKVLNPNRKKIESKGIKSVRSRVGDIRSHLSEDYRHITTDQFKDLMVCQLLHIDHIDQAKRYHLT----EKDWAAIDALADEKYKNWDWNYGNSPQYSYHRDARFPSGTYDFHLEIEKGI-ITNCRIYGDFFSSKDISDIENLLIGCPMKEELVLEKLSTVSLEDYFGQTSPEEIKAVLFP |
| 2E5A Chain:A ((19-281)) | -------------------LAVEDWIHDHMNLEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKL----VVRALKAVHPHLDVQATKRFDLLLDGQFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKN----LMEKDPTLTCEVVINAVATEYATSHQIDN--HIHLINPTDETVFPGINSKAIE-LQTWEWIYGKTPKFSV--DTSFTVLH--SHVEIKVFIDVKNGRIEVCNIEAPDHWLPLEICDQLNSSLIGSKFSPIETTVDELHSKWNILCEKIKGIM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91484 for 1890 contacts (-48.4/contact) +
2D Compatibility (PS) -27124 + (NN) -11732 + (LL) 2312
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -147028.0 ( -77.79 by residue)
QMean score : 0.413
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