Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVISEDQKTNDLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKL---ADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAESVEFIQNPDGTYSILIKNIQDIQNK |
2CR7 Chain:A ((30-74)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYNGFLEIMKEFKSQ--SIDTPGVIRRVSQLFHEHPDLIVGFNAFLPSGPSSG---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7649 for 201 contacts (-38.1/contact) +
2D Compatibility (PS) -4458 + (NN) -2581 + (LL) 19312
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 2774.0 ( 13.80 by residue)
QMean score : 0.481
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