Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPKTEKGNSLIVGYPQIGLSPFLFSHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK
3HLY Chain:A ((50-67))
-------------------------------------------SSARGIVLGTPPSQPSEAVATALSTIFAAAHNKQAIGLFDSYGGDDEPIDALLAQ
General information:
TITO was launched using:
RESULT:
Template:
3HLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92 for 40 contacts (-2.3/contact) +
2D Compatibility (PS) -2142 + (NN) -3009 + (LL) 2640
1D Compatibility (HY) 400 + (ID) 150
Total energy: -2353.0 ( -58.83 by residue)
QMean score : -0.274
(partial model without unconserved sides chains):
PDB file :
Tito_3HLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HLY-query.scw
PDB file :
Tito_Scwrl_3HLY.pdb
: