Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFEKRQVYYVVITFAICYAIQAYWGAVSNILTTLHKAIFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFSIVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLGSTGKTFHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLTAITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQTLRNRARTYR |
3AJF Chain:A ((41-74)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMIRKPDDPENLSVFLKSAIWMLSHKRDLPGHYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4753 for 141 contacts (-33.7/contact) +
2D Compatibility (PS) -3382 + (NN) 1110 + (LL) 31748
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 23223.0 ( 164.70 by residue)
QMean score : 0.120
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