Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTIENLIIAIVKPLISQPDQLTIKIQDGPEFLEYHLDLDTQDIGRVIGKKGRTITAIRSIVYSVPTQGKKVRLIIDEKE
1K0R Chain:A ((281-341))
-DDPARFVANALSPAKV--VSVSVI--D-QTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPP------
General information:
TITO was launched using:
RESULT:
Template:
1K0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35424 for 400 contacts (-88.6/contact) +
2D Compatibility (PS) -6330 + (NN) -1526 + (LL) 708
1D Compatibility (HY) 1600 + (ID) 350
Total energy: -41322.0 ( -103.31 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1K0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K0R-query.scw
PDB file :
Tito_Scwrl_1K0R.pdb
: