Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKTKSFFGHPRGLSTLFFTEMWERFSYYGMRAILLYYMYYSVSQGGLGMDKTVAASIMAVYGSLVYLSSVIGGFVSDRILGSRKTVLYGGILIMLGHIALATPFGQTA-LFISIALIILGTGLLKPNVSEMVGNLYGENDSRRDAGFSIFVFGINLGA----FISPIVVGYL----GQEVNFHLGFSLAAIGMFFGLLQYTLDGK---KYLTEESLRPNDPLSPEEKSSLYKKVGLILIGIVIVLILLHLMHMLTIEVIIDIFSIIA-IAIPIIYFIKILSSKKISSVERSRVWAYIPLFIASILFWSIEEQGSVVLALFADEQTKLYLNFFGHHI-NFPSSYFQSMNPLFIMLYVPFFAWLWAKWGSKQPSSPKKFAYGLFFAGASFLWMMLPGLLFGVNAKVSPLWLTMSWAIVIVGEMLISPVGLSATSKLAPKAFQAQMMSIWFLSNAAAQAINAQIVKLYTPDTQILYYGVVGGITVVFGFILLFYVPRIEKLMSGVK |
| 4TPH Chain:A ((8-437)) | VSKTHSFM-------TVSLIELWERFGYYGMQALIVYFMVQR-----LGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRTMLLGAGILSVGYALMTVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYE---SKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMHKSLANYGSEPDTRPVN------KKSLAIVLALAALSVVASAIILEY------EDVARVFVYAAGVAVLGIFFHL----------ERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQVFGTHLWTWSPAQFQALNPIWIMVLSPVLAW-----------IAAKFALGFAVVAIGFFIYGFAG-QFAVNGKTSSWVMIWGYASYSLGELLVSGLGLAMIAR---------MMGAYFVASGISQYLGGVVANFASVPQDLVDPLQTLPVYTNLFNKLGVAAVVCTIIALAVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -348500 for 3160 contacts (-110.3/contact) +
2D Compatibility (PS) -39137 + (NN) -8388 + (LL) 3048
1D Compatibility (HY) -45200 + (ID) 6450
Total energy: -444627.0 ( -140.70 by residue)
QMean score : 0.401
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