Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQY-MKIAKQQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
4PSH Chain:A ((3-214)) | -------------------------------DEIKSRGYLLVGLSADFPPFEFVDENGNIVGFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAFSDPYFDAGQVIVVRKD--SDFRPKTYEDLVGKTVAVQIGTTGDIEVSKYDGIKVVRFDKFT-DAFL-ELKRGRADAVVLDSAT---ARAFVAKN-PDLVISSG--VLSSEQYGIAVRKEDTDLLEFINSVLRELKKSPYDVLIEKWFS--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48395 for 1725 contacts (-28.1/contact) +
2D Compatibility (PS) -22689 + (NN) -6766 + (LL) 3624
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -93476.0 ( -54.19 by residue)
QMean score : 0.425
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