Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFKDATAMAQAIKQHKVSSQELVEQAIYKIEEQNVSVNAVVSKQYNEARQAAKYANASNA------PFAGVPILLKDLGQNQKGQLSTSGSQLFKHYYAKQTDYLVQSFEKLGFIILGRTNTPEFGFKNISDSQLHGNVNLPFDHSRNAGGSSGGAAAAVSSGMVPIAGASDGGGSIRIPASFNGLIGLKPSRGRIPVGPSSYRGWQGASSHF----ALTKSVRDTKRLLYYLQSYQVE--SPFPLKKLSKESLFEFSVSKPLKIAVLMDSPLKTKVSSEAKAAIKEAADFLSQKGNHLELVEQPLDGIHSMKTYCMMNSVETA---AMFDGIEKSLGRSMEFSDMELMTWAMYQS---GQRVLAKDYSKLLDSWDQFAATMARFHENYDLILTAATNQPAPFHGQFDLDETLQKQLRHMREFSVSEQQDLIWKMFEDSMAWTPFTHQPNLTGQPSLAIPTHLTKEGLPLGVQLTAAKGREDLLLAVAELFEKEKQFKGPVCH |
| 2G5I Chain:A ((15-475)) | ------------IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKD-NIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRV-----SRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDI-KGLKVA-LPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP-NTKFGIPSYYVIASSEASSNLSRFDGIRYGY-HSKEAHSLEEL-YKMSRSEGFGKEVKRRIF------LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPV----NLAGLPGISVPCGQSN-GRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHDVYEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16500 for 4223 contacts (-3.9/contact) +
2D Compatibility (PS) -46758 + (NN) -6221 + (LL) 2048
1D Compatibility (HY) -20400 + (ID) 6000
Total energy: -93831.0 ( -22.22 by residue)
QMean score : 0.337
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