Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISEEEVRHVANLSKLRFSDQETKEFASSLSKIVDMIELLNEVDTEGVPVTTTMADRKTVMREDIAQPGNNRDDLFKNVPQHQDYYIKVPAILEDGGDA
4WJ3 Chain:C ((9-103))
MALERSDVEKIAHLARLGLSEADLPRTTETLNNILGLIDQMQAVDTSGVEPLAHPLEATQRLRPDAVTETDHRDAYQTIAPAVEEGLYLVPKVIES----
General information:
TITO was launched using:
RESULT:
Template:
4WJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6297 for 371 contacts (-17.0/contact) +
2D Compatibility (PS) -10020 + (NN) -3674 + (LL) -496
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -26787.0 ( -72.20 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_4WJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WJ3-query.scw
PDB file :
Tito_Scwrl_4WJ3.pdb
: