Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIFILEDDFVQQAHFEKIIKEIRVQYNLHFKTVETFAKPVQLLESIYEIGLHNLFFLDIEIKNDEQMGLEVAKQIRQVDPYAQIVFVTTHSELMPLTFR-YQVSALDYIDKGLSQEEFSQRIEEVLLYVDGICNKPLVENSFYFKSRYSQVQLPFNDLLYIETSSRSHRVVLYTEKDRMEFTATLGDILKQEPRLFQCHRSFLVNPLNIFKVDRIDRLVYFQNGTTCLVSRNKVRDIVSIVDKYQKDRKR |
1YIO Chain:A ((49-120)) | ----------------------------------------------------HGCLVLDMRMPG--MSGIELQEQLTAISDGIPIVFITAHGDI-PMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQLNAERRQARETQDQLEQLFSSLTGREQQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIMQKLNVRSLANLVHLVEKY-------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -44196 for 438 contacts (-100.9/contact) +
2D Compatibility (PS) -7301 + (NN) 780 + (LL) 8488
1D Compatibility (HY) -8400 + (ID) 950
Total energy: -51579.0 ( -117.76 by residue)
QMean score : 0.607
|
|
|