Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEV---NA--LKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHI-----------GYSKYHEGVAILSLKPL-KPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWF-E--------KGFAEEWKRLETTLLE----VETPLLLMGDFNNPTGNQGYELVLN-SPLALKDSHQIANHVFGDHTIMADIDG---WE-GNKKALKVDHIFTSEDLSIS-------------SSQVV--FEGGEAPVVSDHYGLEITMDF |
| 3I41 Chain:A ((9-297)) | DLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKL------------------------LSNVKK-EYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDMLKNLN--VNDVLYAGH----NSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAAAYYYVYNDFSDHYPIKAYSK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100736 for 1977 contacts (-51.0/contact) +
2D Compatibility (PS) -25167 + (NN) -2510 + (LL) 1676
1D Compatibility (HY) -2400 + (ID) 2150
Total energy: -131287.0 ( -66.41 by residue)
QMean score : 0.302
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