Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQQYIVEPKKGLGLKLKKGQILKVVDVEGQQVADFVAYHAKDFYEHLDQGATIDANHSIHVKVNDHLYSNLYKPMLTLIEDTV-GKHDLLLPACRPDMNRLLYGKQKDE-FQDTCYDNMNRALEQFGVPKPHMHYPFAIFMNTVLDEKGNLSVETPLSNAGDYVRLRAEMDLIVAFSSCPIEKGKCNGDSVTSIRVEVS
3SIY Chain:A ((37-227))----YTIPARQGRAIRMAQGEALMVINRDGSQIGDFWAFVEGDCGEYLSMEHLRPTLRRVSPRPGDVLVSNRRRPILTLLEDSSPGVHDTLVASC--DVHR--YAQLGHEGYHDNCTDNLRMALGALGLRPTTVPCPLNLWMNTPVVEGGAMEWRPPVSRRGDHVLFRAELDVVVVISCCPMDLLPINGEEAQPRALDV-


General information:
TITO was launched using:
RESULT:

Template: 3SIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1095 -111729 -102.04 -591.16
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -102.04
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_3SIY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SIY-query.scw
PDB file : Tito_Scwrl_3SIY.pdb: