Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKFALLFIALVTAVVISACGNQSTSSKGSDTKKEQITVKHQLDKNGT-KVPKNPKKVVVFDFGSLDTLDKLGLDDI-VA--GLPKQVLPKYLSKFKDDKYADVGSLKEPDFDKVAELDPDLIII-SARQSESYKEFSKIAPTIYLGVDTAKYMESFKSDAETIGKIFDKEDKVKDELANIDHSIADVKKTAEKLNKNGLVIMANDGKISAFG-PKSRY--GLIHDV-FGVAPADQNIKASTHGQSVSY-----EYISKTNPDYLFVIDRGTAIGETSSTKQVVENDYVKNVNAVKNGHVIYLDSATWYLSGGGLESMTQMIKEVKDGLEK
3LHS Chain:A ((8-287))------------------------------------ISVK---DENGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGD--YTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINS-FKTIAKALNKEKEGEKRLAEHDKLINKYKDEI-KFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIM-TDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRDVWARS-RGLISSEEMAKEL------


General information:
TITO was launched using:
RESULT:

Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1376 -125281 -91.05 -470.98
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -91.05
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_3LHS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LHS-query.scw
PDB file : Tito_Scwrl_3LHS.pdb: